Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
insNTransposase insN for insertion sequence element IS911; silverDB:etchr00951. (112 aa)    
Predicted Functional Partners:
spaN
Type III secretion apparatus protein; silverDB:etchr02678.
  
     0.749
ETA_33060
Transposase (orfA), similar to ISPsy26 (IS3 family); silverDB:etchr03292.
  
     0.749
ETA_26920
Transposase (IS3 family, orf B), similar to ISPsy26; silverDB:etchr02680.
 
  
 0.729
ETA_33070
Transposase (orfB), similar to ISPsy26 (IS3 family); silverDB:etchr03293.
 
  
 0.729
ETA_09580
Hypothetical protein; silverDB:etchr00949.
       0.553
ETA_09590
Hypothetical protein; silverDB:etchr00950.
       0.553
ybjD
Hypothetical protein YbjD; silverDB:etchr02151.
  
   
 0.408
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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