Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yfhKPutative 2-component sensor protein; silverDB:etchr00999. (475 aa)    
Predicted Functional Partners:
ETA_10100
Two-component system response regulator; silverDB:etchr01001.
 
 
 0.996
yfhG
Putative transcriptional regulator of two-component regulator protein; silverDB:etchr01000.
 
 
 
 0.973
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
     
 0.902
arcB
Aerobic respiration control sensor protein ArcB; silverDB:etchr00308.
 
 
 0.809
barA
Signal transduction histidine-protein kinase BarA; silverDB:etchr02713.
  
 
 0.729
rof
Rho-binding antiterminator protein; silverDB:etchr00902.
  
     0.714
glnB
Nitrogen regulatory protein P-II; silverDB:etchr01002; Belongs to the P(II) protein family.
     
 0.707
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
  
 
 0.696
pspC
Phage shock protein C; silverDB:etchr01631.
  
   0.692
ETA_16440
Conserved hypothetical protein; silverDB:etchr01634.
  
     0.688
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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