STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yeeAPutative inner membrane protein YeeA; silverDB:etchr01354. (352 aa)    
Predicted Functional Partners:
ypfN
Conserved hypothetical protein YpfN; silverDB:etchr01062.
  
     0.746
ygaC
Putative cytoplasmic protein; silverDB:etchr00932.
  
     0.733
ampE
AmpE protein (Putative transmembrane protein); silverDB:etchr00798.
  
     0.727
yhfK
Putative inner membrane protein YhfK; silverDB:etchr03177.
 
     0.721
aaeX
Protein AaeX; silverDB:etchr00291.
 
  
 0.712
tsgA
Fucose permease TsgA; silverDB:etchr03181.
  
     0.707
bssS
Biofilm regulator; silverDB:etchr02042.
  
     0.706
ETA_20510
Putative lipoprotein (DUF1439); silverDB:etchr02039.
  
     0.688
yfeZ
Conserved hypothetical protein YfeZ; silverDB:etchr01079.
  
     0.663
ynfB
Conserved hypothetical protein YnfB; silverDB:etchr01741; Belongs to the UPF0482 family.
  
     0.660
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.