Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ETA_14550Conserved hypothetical protein; silverDB:etchr01445. (245 aa)    
Predicted Functional Partners:
psiF
Phosphate starvation-inducible protein; silverDB:etchr02555.
  
     0.464
ETA_19590
Hypothetical protein; silverDB:etchr01948.
  
     0.459
walW
Lipopolysaccharide biosynthesis protein; silverDB:etchr00077.
  
     0.439
ETA_14540
Regulatory protein, LysR; silverDB:etchr01444; Belongs to the LysR transcriptional regulatory family.
       0.415
ETA_33760
Transporter, LysE family; silverDB:etchr03362.
  
     0.412
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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