Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
yecD | yecE | ETA_14840 | ETA_14830 | Conserved hypothetical protein YecD; silverDB:etchr01474. | Conserved hypothetical protein YecE; silverDB:etchr01473. | 0.677 |
yecD | yecN | ETA_14840 | ETA_14820 | Conserved hypothetical protein YecD; silverDB:etchr01474. | Conserved hypothetical protein YecN; silverDB:etchr01472. | 0.446 |
yecE | yecD | ETA_14830 | ETA_14840 | Conserved hypothetical protein YecE; silverDB:etchr01473. | Conserved hypothetical protein YecD; silverDB:etchr01474. | 0.677 |
yecE | yecN | ETA_14830 | ETA_14820 | Conserved hypothetical protein YecE; silverDB:etchr01473. | Conserved hypothetical protein YecN; silverDB:etchr01472. | 0.664 |
yecE | yecO | ETA_14830 | ETA_14810 | Conserved hypothetical protein YecE; silverDB:etchr01473. | Conserved hypothetical protein YecO; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | 0.500 |
yecE | yecP | ETA_14830 | ETA_14800 | Conserved hypothetical protein YecE; silverDB:etchr01473. | Putative enzyme YecP; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. | 0.544 |
yecN | yecD | ETA_14820 | ETA_14840 | Conserved hypothetical protein YecN; silverDB:etchr01472. | Conserved hypothetical protein YecD; silverDB:etchr01474. | 0.446 |
yecN | yecE | ETA_14820 | ETA_14830 | Conserved hypothetical protein YecN; silverDB:etchr01472. | Conserved hypothetical protein YecE; silverDB:etchr01473. | 0.664 |
yecN | yecO | ETA_14820 | ETA_14810 | Conserved hypothetical protein YecN; silverDB:etchr01472. | Conserved hypothetical protein YecO; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | 0.834 |
yecN | yecP | ETA_14820 | ETA_14800 | Conserved hypothetical protein YecN; silverDB:etchr01472. | Putative enzyme YecP; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. | 0.842 |
yecO | yecE | ETA_14810 | ETA_14830 | Conserved hypothetical protein YecO; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | Conserved hypothetical protein YecE; silverDB:etchr01473. | 0.500 |
yecO | yecN | ETA_14810 | ETA_14820 | Conserved hypothetical protein YecO; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | Conserved hypothetical protein YecN; silverDB:etchr01472. | 0.834 |
yecO | yecP | ETA_14810 | ETA_14800 | Conserved hypothetical protein YecO; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | Putative enzyme YecP; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. | 0.979 |
yecP | yecE | ETA_14800 | ETA_14830 | Putative enzyme YecP; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. | Conserved hypothetical protein YecE; silverDB:etchr01473. | 0.544 |
yecP | yecN | ETA_14800 | ETA_14820 | Putative enzyme YecP; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. | Conserved hypothetical protein YecN; silverDB:etchr01472. | 0.842 |
yecP | yecO | ETA_14800 | ETA_14810 | Putative enzyme YecP; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs. | Conserved hypothetical protein YecO; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM). | 0.979 |