STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA_15020Conserved hypothetical protein (DUF533); silverDB:etchr01492. (217 aa)    
Predicted Functional Partners:
spy
Spheroplast protein Y; silverDB:etchr01842.
  
  
 0.891
cpxP
Periplasmic repressor of cpx regulon by interaction with CpxA; silverDB:etchr00095.
  
  
 0.779
yieE
Conserved hypothetical protein YieE; silverDB:etchr03444; Belongs to the P-Pant transferase superfamily.
  
     0.736
ymcC
Putative lipoprotein YmcC; silverDB:etchr03096.
  
     0.657
ydhK
Putative transport protein YdhK; silverDB:etchr01783.
  
     0.655
yciW
Conserved hypothetical protein YciW; silverDB:etchr01621.
  
     0.641
ydiV
Conserved hypothetical protein YdiV; silverDB:etchr01821.
  
     0.614
yiaG
Putative HTH-type transcriptional regulator YiaG; silverDB:etchr03401.
  
     0.593
ptrB
Protease II; silverDB:etchr01493.
       0.587
ymcB
Conserved hypothetical protein YmcB; silverDB:etchr03095.
  
     0.552
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.