STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA_18640Hypothetical protein; silverDB:etchr01853. (703 aa)    
Predicted Functional Partners:
ETA_18630
OmpA family protein; silverDB:etchr01852.
 
 
 0.980
ETA_18650
Conserved hypothetical protein; silverDB:etchr01854.
 
  
 0.975
ETA_06140
Putative membrane protein; silverDB:etchr00607.
  
  
 
0.904
ETA_06180
Conserved hypothetical protein; silverDB:etchr00611.
 
  
 0.881
ETA_06130
OmpA family protein; silverDB:etchr00606.
 
 
 0.852
ETA_06120
Conserved hypothetical protein; silverDB:etchr00605.
 
  
 0.837
ETA_06170
Conserved hypothetical protein; silverDB:etchr00610.
 
  
 0.837
ETA_06300
Conserved hypothetical protein; silverDB:etchr00622.
 
  
 0.831
ETA_06310
Conserved hypothetical protein; silverDB:etchr00623.
 
  
 0.829
ETA_06290
Conserved hypothetical protein; silverDB:etchr00621.
 
  
 0.825
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.