Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fhaB2Hypothetical protein; silverDB:etchr01951. (454 aa)    
Predicted Functional Partners:
hecB
Hemolysin activator protein; silverDB:etchr01940.
 
 
 0.770
ETA_19630
Hypothetical protein; silverDB:etchr01952.
       0.762
ETA_30840
Putative activator or transporter protein of haemolysin-like protein; silverDB:etchr03071.
 
 
 0.758
ETA_30830
Putative filamentous hemagglutinin; silverDB:etchr03070.
     0.707
csuC
CsuC protein, similar to fimbrial chaperone proteins (chaperone-usher pili assembly system); silverDB:etchr00456.
  
    0.683
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
 
 
 
 0.673
ETA_25590
Hypothetical protein, probable fragment; silverDB:etchr02547.
  
     0.632
ETA_22400
Conserved hypothetical protein; silverDB:etchr02228.
  
     0.590
ETA_33760
Transporter, LysE family; silverDB:etchr03362.
  
     0.585
ETA_25600
Conserved hypothetical protein; silverDB:etchr02548.
  
     0.555
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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