STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoQVirulence sensor histidine kinase; silverDB:etchr01960. (481 aa)    
Predicted Functional Partners:
phoP
Two-component response regulator of virulence determinants; silverDB:etchr01959.
 0.999
arcB
Aerobic respiration control sensor protein ArcB; silverDB:etchr00308.
 
 
0.903
purB
Adenylosuccinate lyase; silverDB:etchr01958; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
   0.833
barA
Signal transduction histidine-protein kinase BarA; silverDB:etchr02713.
  
 
 0.802
rstA
Response regulator in two-component regulatory system with RstB; silverDB:etchr01668.
 
 
 0.769
yicH
Conserved hypothetical protein YicH; silverDB:etchr00037.
  
     0.754
pmrA
Two-component system response regulator; silverDB:etchr00335.
 
 0.741
baeR
Two-component system response regulator; silverDB:etchr01297.
 
 
 0.689
phoB
Response regulator in two-component regulatory system with PhoR; silverDB:etchr02536.
 
 
 0.689
cpxR
Two-component response regulator; silverDB:etchr00094.
 
 
 0.678
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.