Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
phoQVirulence sensor histidine kinase; silverDB:etchr01960. (481 aa)    
Predicted Functional Partners:
phoP
Two-component response regulator of virulence determinants; silverDB:etchr01959.
 0.999
purB
Adenylosuccinate lyase; silverDB:etchr01958; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
   0.807
arcB
Aerobic respiration control sensor protein ArcB; silverDB:etchr00308.
  
 
 0.774
rstA
Response regulator in two-component regulatory system with RstB; silverDB:etchr01668.
 
 
 0.761
yicH
Conserved hypothetical protein YicH; silverDB:etchr00037.
  
     0.754
pmrA
Two-component system response regulator; silverDB:etchr00335.
 
 0.747
barA
Signal transduction histidine-protein kinase BarA; silverDB:etchr02713.
  
 
 0.729
phoB
Response regulator in two-component regulatory system with PhoR; silverDB:etchr02536.
 
 
 0.702
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
  
 
 0.696
cpxR
Two-component response regulator; silverDB:etchr00094.
 
 
 0.662
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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