STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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ycfXPutative NAGC-like transcriptional regulator YcfX; Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P. (303 aa)    
Predicted Functional Partners:
ptsG-2
PTS system, glucose-specific IIBC component; silverDB:etchr02318.
  
 0.981
nagA
N-acetylglucosamine-6-phosphate deacetylase; silverDB:etchr02320.
 
 
 0.936
crr
PTS system, glucose-specific IIa component; silverDB:etchr01088.
  
 
 0.906
murQ
Putative phosphosugar-binding protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily.
    
 0.905
lolE
Lipoprotein releasing system transmembrane protein; silverDB:etchr01966.
      0.899
npdA
NAD-dependent deacetylase; silverDB:etchr01964; Belongs to the sirtuin family. Class III subfamily.
  
  
 0.804
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
       0.778
ETA_19790
ABC-type transport system, involved in lipoprotein release, permease component; silverDB:etchr01968.
       0.778
nagC
N-acetylglucosamine repressor; silverDB:etchr02321.
  
     0.765
scrA
PTS system sucrose-specific EIIBC component (EIIBC-Scr); silverDB:etchr00945.
  
 
 0.744
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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