STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
artPArginine transport ATP-binding protein; silverDB:etchr02156. (244 aa)    
Predicted Functional Partners:
artM
Arginine transport system permease protein; silverDB:etchr02159.
 
 
 0.990
artQ
Arginine transport system permease protein; silverDB:etchr02158.
 
 
 0.987
artI
Arginine-binding periplasmic protein 1; silverDB:etchr02157; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.984
artJ
Arginine-binding periplasmic protein 2; silverDB:etchr02160; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.974
sapD
Peptide transport system ATP-binding protein; silverDB:etchr01623; Belongs to the ABC transporter superfamily.
 
    
0.730
glnP
Glutamine transport system permease protein; silverDB:etchr02196.
 
     0.716
ETA_27130
Putative amino-acid transport system permease protein; silverDB:etchr02701.
 
     0.684
gltK-2
Glutamate/aspartate transport system permease; silverDB:etchr02332.
 
     0.678
gltJ
GltJ protein; silverDB:etchr00477.
  
     0.614
hisQ
Histidine transport system permease protein; silverDB:etchr01172.
 
  
 0.611
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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