STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA_21990RND efflux system, outer membrane lipoprotein, NodT precursor; silverDB:etchr02187. (515 aa)    
Predicted Functional Partners:
emrK
Putative multidrug resistance protein K; silverDB:etchr02189.
 
   0.941
ETA_22000
Drug resistance transporter; silverDB:etchr02188; Belongs to the major facilitator superfamily.
 
 
 0.925
acrA
Acriflavine resistance protein A precursor; silverDB:etchr02468; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.824
ETA_27740
Secretion protein HlyD; silverDB:etchr02762; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.810
mdtA
Multidrug resistance protein; silverDB:etchr01302; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.787
acrB
Acriflavine resistance protein B; silverDB:etchr02469.
 
 0.785
ETA_10780
(Acriflavine resistance protein B) same #2469; silverDB:etchr01069.
 
 0.776
emrA
Multidrug resistance secretion protein A; silverDB:etchr00921.
 
 
 0.753
macB
Macrolide-specific ABC-type efflux carrier; silverDB:etchr02997; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
 
 0.732
aaeA
P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux pump protein A); Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.647
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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