Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
gntPGluconate permease; silverDB:etchr02352. (449 aa)    
Predicted Functional Partners:
gntK
Thermoresistant gluconokinase (Gluconate kinase 2); silverDB:etchr03238.
 
  
 0.628
ETA_23680
Putative oxidoreductase; silverDB:etchr02356.
     
 0.625
ETA_23670
Conserved hypothetical protein; silverDB:etchr02355.
     
 0.616
fucA
L-fuculose-1-phosphate aldolase; silverDB:etchr02354.
     
 0.608
ygbM
Putative glyoxylate induced protein YgbM; silverDB:etchr02353; Belongs to the hyi family.
       0.607
garK
Glycerate kinase 2; silverDB:etchr02714; Belongs to the glycerate kinase type-1 family.
 
  
 0.584
xylB
Xylulose kinase; silverDB:etchr01656.
  
  
 0.452
fruA
PTS system, fructose-specific IIBC component; silverDB:etchr01266.
     
 0.403
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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