Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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gene co-occurrence
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[Homology]
Score
cioAUbiquinol oxidase subunit I, cyanide insensitive; silverDB:etchr02360. (474 aa)    
Predicted Functional Partners:
cioB
Ubiquinol oxidase subunit II, cyanide insensitive; silverDB:etchr02361.
 0.999
cydB
Cytochrome D ubiquinol oxidase subunit II; silverDB:etchr02287.
 0.996
ybgT
Probable YbgT protein; silverDB:etchr02286.
  
 0.976
cydA
Cytochrome D ubiquinol oxidase subunit I; silverDB:etchr02288.
  
  
 
0.917
cydD
ATP-binding component of cytochrome-related transport, Zn sensitive; silverDB:etchr02145.
 
  
 0.774
cydC
ABC superfamily (Atp&memb), cytochrome-related transporter; silverDB:etchr02146.
 
  
 0.644
cyoD
Cytochrome o ubiquinol oxidase protein cyoD (Ubiquinol oxidase chain D); silverDB:etchr02506.
     
 0.591
putA
Bifunctional protein dehydrogenase/ delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
     
 0.570
sdhB
Succinate dehydrogenase, iron sulfur protein; silverDB:etchr02293; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
     
 0.561
nuoA
NADH dehydrogenase I chain A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
     
 0.558
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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