Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ETA_24320Hypothetical protein; silverDB:etchr02420. (335 aa)    
Predicted Functional Partners:
int-2
Prophage integrase; silverDB:etchr02421; Belongs to the 'phage' integrase family.
       0.494
ETA_24300
Hypothetical protein; silverDB:etchr02418.
       0.452
ETA_24310
Putative phage-related protein (prophage CP4-57 regulatory protein); silverDB:etchr02419.
       0.452
ETA_24250
Hypothetical bacteriophage protein; silverDB:etchr02413.
       0.439
ETA_24260
Hypothetical protein; silverDB:etchr02414.
       0.439
ETA_24270
Similar to phage immunity repressor protein; silverDB:etchr02415.
       0.439
ETA_24280
Hypothetical protein; silverDB:etchr02416.
       0.439
ETA_24290
Putative phage anti-repressor protein; silverDB:etchr02417.
       0.439
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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