Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
mdlBMultidrug resistance-like ATP-binding protein; silverDB:etchr02484. (584 aa)    
Predicted Functional Partners:
mdlA
Multidrug resistance-like ATP-binding protein; silverDB:etchr02485.
 
  
 
0.982
aapP
L-amino acid ABC transporter ATP-binding protein; silverDB:etchr00250.
 
     
0.839
ybbL
Putative ABC transporter ATP-binding protein; silverDB:etchr02364.
 
    
0.754
glnQ
Glutamine transport ATP-binding protein; silverDB:etchr02197.
 
     
0.718
ETA_24980
AsnC-family regulatory protein; silverDB:etchr02486.
  
    0.634
cysA
Sulfate/thiosulfate import ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
    
0.596
proV
Glycine betaine/L-proline transport ATP-binding protein ProV; silverDB:etchr00926.
 
     
0.577
amtB
Ammonia channel precursor (Ammonia transporter); silverDB:etchr02481.
   
   0.558
glnK
Nitrogen regulatory protein P-II 2; silverDB:etchr02482; Belongs to the P(II) protein family.
       0.554
ETA_24950
Hypothetical protein; silverDB:etchr02483.
       0.554
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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