STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA_24980AsnC-family regulatory protein; silverDB:etchr02486. (157 aa)    
Predicted Functional Partners:
asnC
AsnC-family transcriptional regulator; silverDB:etchr00002.
  
     0.764
mdlB
Multidrug resistance-like ATP-binding protein; silverDB:etchr02484.
  
    0.634
mdlA
Multidrug resistance-like ATP-binding protein; silverDB:etchr02485.
  
    0.634
pagO
PagO, putative integral membrane protein of unknown function; silverDB:etchr02487.
       0.631
putA
Bifunctional protein dehydrogenase/ delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
     
 0.514
ETA_03080
Glutamate synthase (NADPH); silverDB:etchr00307.
     
 0.492
amtB
Ammonia channel precursor (Ammonia transporter); silverDB:etchr02481.
     
 0.483
glnK
Nitrogen regulatory protein P-II 2; silverDB:etchr02482; Belongs to the P(II) protein family.
       0.471
ETA_24950
Hypothetical protein; silverDB:etchr02483.
       0.461
nadR
Transcriptional regulator NadR; silverDB:etchr00666.
   
  
 0.434
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.