Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ETA_25530Conserved hypothetical protein; silverDB:etchr02541. (334 aa)    
Predicted Functional Partners:
ETA_25520
AraC family transcriptional regulator; silverDB:etchr02540.
 
    0.811
ETA_34300
Putative aminotransferase; silverDB:etchr03416; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     0.787
ETA_25540
Putative ethanolamin permease; silverDB:etchr02542.
 
     0.685
metL
Bifunctional aspartokinase/homoserine dehydrogenase II (AKII-HDII); silverDB:etchr00127; In the C-terminal section; belongs to the homoserine dehydrogenase family.
  
 
 0.645
thrA
Bifunctional aspartokinase/homoserine dehydrogenase I (AKI-HDI); silverDB:etchr00690; In the C-terminal section; belongs to the homoserine dehydrogenase family.
  
 
 0.645
thrC
Threonine synthase; silverDB:etchr00692.
    
 0.569
metB
Cystathionine gamma-synthase; silverDB:etchr00126.
     
  0.500
ETA_11200
Universal stress family protein; silverDB:etchr01111.
  
     0.433
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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