STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA_25540Putative ethanolamin permease; silverDB:etchr02542. (454 aa)    
Predicted Functional Partners:
ETA_25530
Conserved hypothetical protein; silverDB:etchr02541.
 
     0.694
ETA_25520
AraC family transcriptional regulator; silverDB:etchr02540.
 
     0.625
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
  
 
 0.519
amyA
Cytoplasmic alpha-amylase; silverDB:etchr01410.
   
 0.492
palI
Sucrose isomerase; silverDB:etchr01644.
   
 0.492
ETA_32250
Sucrose phosphorylase; silverDB:etchr03211.
   
 0.492
rdgC
Recombination associated protein; May be involved in recombination; Belongs to the RdgC family.
       0.491
ETA_13580
8-amino-7-oxononanoate synthase; silverDB:etchr01348.
  
 
 0.433
pheA
P-protein [includes: Chorismate mutase (EC 5.4.99.5) (CM); silverDB:etchr02635.
   
 
 0.416
ETA_13460
Succinylglutamate desuccinylase/aspartoacylase; silverDB:etchr01336.
 
     0.407
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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