STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA_25580Conserved hypothetical protein; silverDB:etchr02546. (311 aa)    
Predicted Functional Partners:
aroM
Protein of aro operon, regulated by aroR; silverDB:etchr02545.
 
     0.963
ETA_25590
Hypothetical protein, probable fragment; silverDB:etchr02547.
 
     0.934
ETA_25600
Conserved hypothetical protein; silverDB:etchr02548.
 
     0.880
ETA_25610
Transcriptional regulatory protein, IclR family; silverDB:etchr02549.
 
     0.672
ppnP
Conserved hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
       0.606
ETA_22400
Conserved hypothetical protein; silverDB:etchr02228.
  
     0.535
ETA_13940
ABC transporter, ATP-binding protein; silverDB:etchr01384; Belongs to the ABC transporter superfamily.
 
  
 0.525
dppF
Dipeptide transport ATP-binding protein; silverDB:etchr03381; Belongs to the ABC transporter superfamily.
  
    0.467
ETA_21910
Putative ABC transporter ATP-binding protein; silverDB:etchr02179; Belongs to the ABC transporter superfamily.
  
  
 0.460
ETA_23880
Putative ATP-binding component of ABC transporter; silverDB:etchr02376; Belongs to the ABC transporter superfamily.
  
  
 0.460
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.