Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
ETA_25580Conserved hypothetical protein; silverDB:etchr02546. (311 aa)    
Predicted Functional Partners:
aroM
Protein of aro operon, regulated by aroR; silverDB:etchr02545.
 
     0.959
ETA_25590
Hypothetical protein, probable fragment; silverDB:etchr02547.
 
     0.932
ETA_25600
Conserved hypothetical protein; silverDB:etchr02548.
 
     0.877
ETA_25610
Transcriptional regulatory protein, IclR family; silverDB:etchr02549.
 
     0.672
ppnP
Conserved hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
       0.580
dppF
Dipeptide transport ATP-binding protein; silverDB:etchr03381; Belongs to the ABC transporter superfamily.
  
   0.563
ETA_22400
Conserved hypothetical protein; silverDB:etchr02228.
  
     0.535
ETA_13930
ABC transporter, permease protein; silverDB:etchr01383.
  
   0.492
oppC
Oligopeptide transport system permease protein; silverDB:etchr01576.
  
   0.492
ETA_21880
Putative transport system permease protein; silverDB:etchr02176.
  
   0.492
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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