STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacZBeta-galactosidase (Lactase); silverDB:etchr02556; Belongs to the glycosyl hydrolase 2 family. (1026 aa)    
Predicted Functional Partners:
galM
Galactose 1-epimerase (Mutarotase); Converts alpha-aldose to the beta-anomer.
 
 
 0.940
glk
Glucokinase; silverDB:etchr01105; Belongs to the bacterial glucokinase family.
     
 0.906
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.743
fruK
1-phosphofructokinase; silverDB:etchr01265; Belongs to the carbohydrate kinase PfkB family.
   
    0.737
bglX
Periplasmic beta-glucosidase; silverDB:etchr02230; Belongs to the glycosyl hydrolase 3 family.
 
   
 0.504
ptsG-2
PTS system, glucose-specific IIBC component; silverDB:etchr02318.
  
  
 0.503
adhE
Aldehyde-alcohol dehydrogenase; silverDB:etchr01571; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.496
barA
Signal transduction histidine-protein kinase BarA; silverDB:etchr02713.
     
 0.459
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
  
  
 0.459
yghA
Putative oxidoreductase YghA; silverDB:etchr00453.
   
  
 0.457
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.