STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA_25710Hypothetical protein; silverDB:etchr02559. (98 aa)    
Predicted Functional Partners:
tir
Transfer inhibition protein Tir; silverDB:etchr02560.
 
     0.894
ETA_19380
Conserved hypothetical protein; silverDB:etchr01927.
  
     0.763
ETA_13160
Conserved hypothetical protein; silverDB:etchr01306.
  
     0.760
ETA_09420
Hypothetical protein; silverDB:etchr00933.
  
     0.719
ETA_22400
Conserved hypothetical protein; silverDB:etchr02228.
  
     0.708
ETA_32800
Putative exported protein; silverDB:etchr03266.
  
     0.708
ETA_32110
Conserved hypothetical protein; silverDB:etchr03197.
  
     0.694
ETA_20960
Conserved hypothetical protein; silverDB:etchr02084; Belongs to the UPF0319 family.
  
     0.683
mscS-2
Putative mechanosensitive ion channel protein; silverDB:etchr02232.
  
     0.656
ycfT
Inner membrane protein YcfT; silverDB:etchr01419.
  
     0.640
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.