Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ETA_26320Transcriptional regulator, GntR family; silverDB:etchr02620. (238 aa)    
Predicted Functional Partners:
ETA_26310
Asp/Glu racemase; silverDB:etchr02619.
 
     0.954
ETA_26300
DNA methylase, fragment; silverDB:etchr02617.
 
     0.900
ETA_26330
Putative permease; silverDB:etchr02621.
 
     0.860
ETA_26220
Putative transcriptional regulator; silverDB:etchr02610.
  
   
 0.630
nadR
Transcriptional regulator NadR; silverDB:etchr00666.
   
  
 0.563
uahA
Urea amidolyase; silverDB:etchr00680.
       0.547
ETA_17360
TonB-dependent haemoglobin/transferrin/lactoferrin receptor; silverDB:etchr01725.
  
     0.514
ETA_25610
Transcriptional regulatory protein, IclR family; silverDB:etchr02549.
  
  
 0.467
ilvH
Acetolactate synthase III, valine sensitive, small subunit; silverDB:etchr00735.
   
    0.448
pdhR
Pyruvate dehydrogenase complex repressor; silverDB:etchr00804.
 
  
 0.415
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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