STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yafDIntegrase, fragment; silverDB:etchr02628. (268 aa)    
Predicted Functional Partners:
yijD
Putative inner membrane protein; silverDB:etchr00141.
  
     0.711
ETA_25970
Putative esterase; silverDB:etchr02585; Belongs to the UPF0255 family.
 
     0.705
yihD
Conserved hypothetical protein YihD; silverDB:etchr00021.
  
     0.663
ETA_28430
Putative exported protein; silverDB:etchr02831.
  
     0.655
ycbG
Conserved hypothetical protein (DUF1047); Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.
  
     0.628
yejM
Putative sulphatase; silverDB:etchr01248.
  
     0.622
ycdY
Conserved hypothetical protein YcdY; silverDB:etchr01433.
  
     0.620
ycbW
Conserved hypothetical protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.596
yhfK
Putative inner membrane protein YhfK; silverDB:etchr03177.
 
     0.590
yihI
Conserved hypothetical protein YihI; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family.
  
     0.583
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.