Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sipD2Putative invasin-like protein (36 kDa membrane antigen); silverDB:etchr02668. (386 aa)    
Predicted Functional Partners:
sipD1
Pathogenicity island effector protein; silverDB:etchr01883.
     
 
0.900
sipB2
Putative Invasin-like protein (62 kDa antigen); silverDB:etchr02670.
  
  
 0.814
sicA2
Type III secretion chaperone; silverDB:etchr02671.
  
  
 0.792
ETA_26790
Hypothetical protein; silverDB:etchr02667.
       0.709
prgI
Type III secretion apparatus; silverDB:etchr01900.
  
 
 0.688
sipB1
Cell invasion protein; silverDB:etchr01885.
  
  
 0.644
sicA1
Type III secretion chaperone; silverDB:etchr01886.
  
  
 0.621
ETA_26810
Hypothetical protein; silverDB:etchr02669.
       0.615
prgH
Type III secretion system protein; silverDB:etchr01899.
  
  
 0.609
acpM
Meromycolate extension acyl carrier protein (ACP); silverDB:etchr02665.
       0.434
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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