STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA_27140Putative amino-acid ABC transporter, ATP-binding protein; silverDB:etchr02702. (254 aa)    
Predicted Functional Partners:
ETA_27130
Putative amino-acid transport system permease protein; silverDB:etchr02701.
  0.996
ETA_27150
Putative amino-acid ABC transporter, periplasmic amino acid-binding protein; silverDB:etchr02703; Belongs to the bacterial solute-binding protein 3 family.
 
  0.983
glnP
Glutamine transport system permease protein; silverDB:etchr02196.
   0.878
ETA_12370
Putative ABC transporter, permease; silverDB:etchr01228.
   0.829
ETA_26200
Putative amino acid ABC transporter, permease protein; silverDB:etchr02608.
   0.819
gltK-2
Glutamate/aspartate transport system permease; silverDB:etchr02332.
 
 0.807
gltJ
GltJ protein; silverDB:etchr00477.
 
   0.797
ETA_26190
Putative amino acid ABC transporter, permease protein; silverDB:etchr02607.
 
   0.794
gltK
GltK protein; silverDB:etchr00478.
 
 
 0.780
gltJ-2
Glutamate/aspartate transport system permease; silverDB:etchr02331.
 
   0.741
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.