Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ETA_28370Hypothetical protein; silverDB:etchr02825. (212 aa)    
Predicted Functional Partners:
ETA_28360
Probable RNA polymerase ECF-type sigma factor; silverDB:etchr02824; Belongs to the sigma-70 factor family. ECF subfamily.
     
 0.832
ETA_28350
Putative thio:disulfide interchange protein, probable fragment; silverDB:etchr02823.
       0.637
ETA_28340
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; silverDB:etchr02822.
       0.575
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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