Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ETA_28490TetR-family transcriptional regulator; silverDB:etchr02837. (217 aa)    
Predicted Functional Partners:
ETA_07620
Conserved hypothetical protein; silverDB:etchr00753.
  
     0.760
priC
Primosomal replication protein N'; silverDB:etchr02465.
  
     0.744
ETA_04630
Putative regulatory protein; silverDB:etchr00463.
  
     0.712
hslJ
Heat shock protein HslJ; silverDB:etchr01863.
  
     0.689
ETA_12870
Probable MFS Superfamily transporter; silverDB:etchr01277.
  
     0.687
secM
Secretion monitor precursor; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
   
 0.671
bscD
Cellulose synthase operon protein D; silverDB:etchr03375.
  
     0.655
srfC
Putative virulence factor; silverDB:etchr01694.
  
     0.644
ETA_30540
Conserved hypothetical protein; silverDB:etchr03041; Belongs to the SUA5 family.
  
     0.642
ETA_17030
Probable ribonuclease inhibitor; silverDB:etchr01693.
  
     0.637
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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