STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fimFMinor fimbrial subunit, polypeptide (FimF); silverDB:etchr02853. (174 aa)    
Predicted Functional Partners:
fimD
Outer membrane usher protein, FimD; silverDB:etchr02854.
 
   0.941
fimC
Type I fimbrial chaperone; silverDB:etchr02855.
 
   0.911
fimG
Minor fimbrial subunit, FimG; silverDB:etchr02852.
  
   0.885
pmfD
Chaperone protein PmfD; silverDB:etchr03006.
  
   0.788
pmfC
Outer membrane usher protein PmfC; silverDB:etchr03007.
  
   0.765
ETA_06570
Fimbrial protein; silverDB:etchr00649.
  
     0.760
pmfA
Major fimbrial subunit PmfA; silverDB:etchr03008.
  
     0.759
ETA_28810
Fimbrial-like protein; silverDB:etchr02869.
  
     0.757
pmfF
Putative minor fimbrial subunit PmfF; silverDB:etchr03004.
  
     0.736
ETA_33010
Fimbrial major subunit; silverDB:etchr03287.
  
     0.728
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.