Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ETA_29940Hypothetical protein; silverDB:etchr02981. (113 aa)    
Predicted Functional Partners:
trxA
silverDB:etchr00194; Belongs to the thioredoxin family.
    
   0.691
trxC
Thioredoxin 2; silverDB:etchr00918; Belongs to the thioredoxin family.
    
   0.691
ETA_24510
Putative thioredoxin-like protein; silverDB:etchr02439.
    
   0.691
ETA_29950
Hypothetical protein; silverDB:etchr02982.
       0.557
ETA_18630
OmpA family protein; silverDB:etchr01852.
  
  
 0.494
ETA_08650
Conserved hypothetical protein; silverDB:etchr00856.
  
  
 0.471
ETA_30010
Conserved hypothetical protein; silverDB:etchr02988.
  
  
 0.471
dcrB
Conserved protein involved in bacteriophage adsorption (DcrB); silverDB:etchr03271.
  
  
 0.471
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
   
  
 0.434
ETA_06310
Conserved hypothetical protein; silverDB:etchr00623.
  
  
 0.415
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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