Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
zntRZn(II)-responsive transcriptional regulator, MerR family; silverDB:etchr03122. (143 aa)    
Predicted Functional Partners:
yhdN
Conserved hypothetical protein YhdN; silverDB:etchr03123.
  
  
 0.933
rpoA
DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.645
barA
Signal transduction histidine-protein kinase BarA; silverDB:etchr02713.
   
 
 0.606
rplQ
50S ribosomal protein L17; silverDB:etchr03124.
       0.506
ETA_03080
Glutamate synthase (NADPH); silverDB:etchr00307.
     
 0.504
glnA
Glutamine synthetase; silverDB:etchr00030.
 
 
 0.497
arcB
Aerobic respiration control sensor protein ArcB; silverDB:etchr00308.
   
 
 0.483
rpoB
DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.460
copA
Copper-transporting P-type ATPase; silverDB:etchr02443.
  
  
 0.450
rpsD
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
  
    0.407
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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