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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
damXConserved hypothetical protein DamX; Non-essential cell division protein. (326 aa)    
Predicted Functional Partners:
dam
DNA adenine methylase (Deoxyadenosyl-methyltransferase); silverDB:etchr03189.
  
  
 0.886
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
  
    0.765
atpI
ATP synthase protein I; silverDB:etchr03467.
  
     0.746
ETA_16810
Conserved hypothetical protein (DUF1471); silverDB:etchr01671.
  
     0.742
ETA_03260
Anti-sigma B factor antagonist; silverDB:etchr00325.
 
     0.734
holE
DNA polymerase III theta subunit; silverDB:etchr01495.
  
     0.724
yecF
Conserved hypothetical protein YecF; silverDB:etchr02067.
  
     0.718
yciC
Conserved hypothetical protein YciC; silverDB:etchr01586.
  
     0.716
ETA_29820
Putative lipoprotein; silverDB:etchr02969.
  
     0.716
tus
DNA replication terminus site-binding protein (Ter protein); silverDB:etchr01751.
  
     0.713
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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