Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ETA_32110Conserved hypothetical protein; silverDB:etchr03197. (275 aa)    
Predicted Functional Partners:
ETA_32100
Predicted fimbrial assembly protein; silverDB:etchr03196.
  
 
 0.988
hofQ
Putative type II secretion system protein; silverDB:etchr03193.
  
 
 0.964
ETA_32080
Hypothetical protein; silverDB:etchr03194.
       0.872
ETA_32090
Hypothetical protein; silverDB:etchr03195.
       0.872
ETA_17030
Probable ribonuclease inhibitor; silverDB:etchr01693.
  
     0.747
ETA_22400
Conserved hypothetical protein; silverDB:etchr02228.
  
     0.747
ETA_34470
Putative lipoprotein; silverDB:etchr03433.
  
     0.736
secM
Secretion monitor precursor; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.733
ETA_19380
Conserved hypothetical protein; silverDB:etchr01927.
  
    0.731
ETA_28430
Putative exported protein; silverDB:etchr02831.
  
     0.722
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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