Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
mgtCMg(2+) transport protein C, mgtC family; silverDB:etchr03366. (232 aa)    
Predicted Functional Partners:
mgtB
Magnesium-transporting ATPase, P-type 1; silverDB:etchr03365.
 
 
 0.890
ETA_12170
Conserved hypothetical protein; silverDB:etchr01208.
  
  
 0.701
hflB
Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
    
 
 0.525
copA
Copper-transporting P-type ATPase; silverDB:etchr02443.
     
 0.438
phoQ
Virulence sensor histidine kinase; silverDB:etchr01960.
      
 0.407
phoP
Two-component response regulator of virulence determinants; silverDB:etchr01959.
   
 
 0.405
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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