Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ETA_34070Putative isochorismatase hydrolase; silverDB:etchr03393. (180 aa)    
Predicted Functional Partners:
ETA_34080
Putative transcriptional regulator; silverDB:etchr03394.
 
    0.967
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
  
 
 0.669
ETA_34100
Hypothetical protein; silverDB:etchr03396.
 
     0.603
dalD
D-arabinitol 4-dehydrogenase; silverDB:etchr03395.
       0.516
ETA_34060
Putative hydrolase; silverDB:etchr03392.
   
 
 0.472
ETA_34050
Hypothetical protein; silverDB:etchr03391.
       0.435
cs1
Clavaminate synthase 1; silverDB:etchr02807.
  
    0.417
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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