Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
dalDD-arabinitol 4-dehydrogenase; silverDB:etchr03395. (467 aa)    
Predicted Functional Partners:
mtlA
PTS system, mannitol-specific enzyme IIABC components; silverDB:etchr03404.
  
  
 0.961
fruA
PTS system, fructose-specific IIBC component; silverDB:etchr01266.
  
 
 0.938
xylB
Xylulose kinase; silverDB:etchr01656.
 
 
 0.938
scrK
Fructokinase; silverDB:etchr01857; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.936
ETA_16670
D-xylulose reductase; silverDB:etchr01657.
 
  
 0.923
ETA_29000
Putative alcohol dehydrogenase; silverDB:etchr02887.
    
 0.906
yniC
Phosphatase YniC; silverDB:etchr01835.
    
  0.903
ETA_16680
Conserved hypothetical protein; silverDB:etchr01658.
    
  0.902
ETA_11960
Putative phosphatase; silverDB:etchr01187.
    
  0.901
ETA_34100
Hypothetical protein; silverDB:etchr03396.
       0.827
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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