Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ETA_34360Transcriptional regulator, LacI family; silverDB:etchr03422. (344 aa)    
Predicted Functional Partners:
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
    
 
 0.673
ETA_03080
Glutamate synthase (NADPH); silverDB:etchr00307.
    
 
 0.636
kguE
Putative epimerase; silverDB:etchr03424.
 
    0.581
ETA_34390
Sugar kinase, ribokinase family; silverDB:etchr03425.
 
    0.564
ETA_34400
General substrate transporter:Major facilitator superfamily; silverDB:etchr03426.
    0.564
tag
DNA-3-methyladenine glycosylase I; silverDB:etchr03421.
       0.488
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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