STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR41841.1SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)    
Predicted Functional Partners:
KTR41193.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.634
KTR39670.1
MT0933-like antitoxin protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.634
KTR38360.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.634
KTR41842.1
acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.589
KTR41956.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.553
KTR40265.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6.
   
 0.553
KTR38361.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.542
KTR42274.1
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.489
KTR41939.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.435
KTR43078.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.431
Your Current Organism:
Curtobacterium oceanosedimentum
NCBI taxonomy Id: 465820
Other names: ATCC 31317, C. oceanosedimentum, Flavobacterium oceanosedimentum
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.