STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR40127.1PTS ascorbate transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (92 aa)    
Predicted Functional Partners:
KTR40128.1
PTS ascorbate transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
KTR40146.1
Phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.948
KTR38683.1
PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.924
KTR40129.1
Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.849
KTR40126.1
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.673
KTR37876.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.630
KTR38260.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.582
KTR40143.1
PTS mannitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.579
KTR40130.1
Pyrimidine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.572
KTR40150.1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
       0.571
Your Current Organism:
Curtobacterium oceanosedimentum
NCBI taxonomy Id: 465820
Other names: ATCC 31317, C. oceanosedimentum, Flavobacterium oceanosedimentum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.