STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTR38193.1Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family. (611 aa)    
Predicted Functional Partners:
KTR40735.1
alpha-L-rhamnosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.753
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.637
KTR38186.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.530
KTR39937.1
Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.521
KTR38684.1
1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.521
KTR40326.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.464
KTR41102.1
Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.428
Your Current Organism:
Curtobacterium oceanosedimentum
NCBI taxonomy Id: 465820
Other names: ATCC 31317, C. oceanosedimentum, Flavobacterium oceanosedimentum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.