STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_0057Acyl dehydratase MaoC. (171 aa)    
Predicted Functional Partners:
Lmac_0058
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.980
cat
4-hydroxybutyrate CoA-transferase.
 
 
 0.951
yfcX
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.870
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase protein.
  
 0.870
Lmac_2148
Polyketide synthase module.
  
 0.825
Lmac_2711
Polyketide synthase module.
  
 0.825
pksJ
Polyketide synthase, type I.
  
 0.815
Lmac_1430
Non-ribosomal peptide synthetase/polyketide synthetase.
   
 0.814
Lmac_2147
Acetyltransferase.
    
 0.772
aceB
Malate synthase A; Belongs to the malate synthase family.
   
 
 0.768
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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