STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_0058Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. (284 aa)    
Predicted Functional Partners:
Lmac_0057
Acyl dehydratase MaoC.
 
 
 0.980
mdcC
Acetyl coenzyme A carboxylase, carboxyltransferase subunit beta; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.
 
 
 0.968
fucA
L-fuculose phosphate aldolase.
  
    0.937
citG
2(5'-triphosphoribosyl)-3'-dephosphocoenzyme A synthase CitG.
 
  
 0.830
cat
4-hydroxybutyrate CoA-transferase.
  
  
 0.825
Lmac_0055
2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase.
 
  
 0.816
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.766
yfcX
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.761
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase protein.
     
 0.761
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 
 0.740
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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