STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_0069Hypothetical protein. (179 aa)    
Predicted Functional Partners:
Lmac_0068
SURF1 family protein.
 
     0.921
Lmac_0070
Cytochrome c oxidase assembly protein.
 
     0.908
Lmac_0072
SCO1/SenC family transporter protein.
 
     0.856
cyoE
Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
     0.854
Lmac_0067
Hypothetical protein.
 
     0.728
dotA
Defect in organelle trafficking protein DotA.
  
     0.660
Lmac_1095
Putative membrane protein YdgA-like protein.
  
     0.592
Lmac_0415
IcmL-like protein.
  
     0.574
enhA_5
Enhanced entry protein EnhA.
  
     0.540
Lmac_3043
Putative helicase/relaxase.
  
     0.536
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.