Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_0094Sel-1 protein. (125 aa)    
Predicted Functional Partners:
Lmac_0093
General secretion pathway protein C.
       0.872
enhC
Enhanced entry protein EnhC.
  
     0.700
flgC
Flagellar basal body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.694
Lmac_2668
Protein IcmE (DotG).
  
     0.624
Lmac_1095
Putative membrane protein YdgA-like protein.
  
     0.613
dotA
Defect in organelle trafficking protein DotA.
  
     0.595
Lmac_0092
O-methyltransferase.
       0.572
Lmac_0768
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.572
ung
Uracil DNA glycosylase; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family.
  
     0.564
Lmac_1628
Polysaccharide deacetylase.
  
     0.558
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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