STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_0178KQDN repeat-containing protein. (570 aa)    
Predicted Functional Partners:
Lmac_0179
TPR repeat containing protein.
 
 
 0.966
Lmac_0180
Hypothetical protein.
 
 
 0.966
Lmac_0181
Hypothetical protein.
 
   
 0.957
Lmac_0183
Hypothetical protein.
 
  
 0.875
Lmac_0182
Hypothetical protein.
 
   
 0.816
Lmac_2436
PAS fold protein.
  
 
 0.815
moxR
Methanol dehydrogenase regulatory protein.
 
  
 0.775
Lmac_0177
Amidase; Belongs to the amidase family.
       0.770
ribA_2
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.700
Lmac_2565
Guanylate cyclase.
    
  0.649
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.