STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_0179TPR repeat containing protein. (336 aa)    
Predicted Functional Partners:
Lmac_0180
Hypothetical protein.
     0.996
Lmac_0178
KQDN repeat-containing protein.
 
 
 0.977
Lmac_0181
Hypothetical protein.
 
     0.969
Lmac_0183
Hypothetical protein.
 
    0.902
Lmac_0182
Hypothetical protein.
 
     0.872
Lmac_0177
Amidase; Belongs to the amidase family.
       0.844
moxR
Methanol dehydrogenase regulatory protein.
 
     0.839
Lmac_1018
Hypothetical protein.
    
  0.732
Lmac_2442
Glycosyl transferase family 2.
  
 
 0.722
Lmac_2436
PAS fold protein.
  
 
 0.701
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.