STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_0251Peptide ABC transporter permease. (325 aa)    
Predicted Functional Partners:
Lmac_0250
Extracellular solute-binding protein.
 
 0.999
Lmac_0252
Peptide ABC transporter permease.
 
 0.999
Lmac_0402
ABC dipeptide/oligopeptide/nickel transport, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.941
ligA
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
  
    0.801
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.793
Lmac_0253
Hypothetical protein.
       0.773
Lmac_1274
T-complex protein 10 C-terminus.
  
 0.698
Lmac_0246
Transmembrane protein.
       0.536
Lmac_0247
Hypothetical protein.
       0.527
Lmac_0248
Hypothetical protein.
       0.527
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.