STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpcEHomoprotocatechuate catabolism bifunctional isomerase/decarboxylase. (245 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase.
  
  
 0.760
sdhA_2
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
  0.666
Lmac_1110
Succinate dehydrogenase cytochrome b556 subunit C.
  
 
  0.666
aceB
Malate synthase A; Belongs to the malate synthase family.
    
 0.665
Lmac_1829
Glutathione S-transferase (maleylacetoacetate isomerase).
   
 
 0.640
Lmac_0058
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
    
  0.636
sdhB
Succinate dehydrogenase iron-sulfur subunit.
  
 
  0.628
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
   
 
  0.622
fadH
2,4-dienoyl-CoA reductase FadH1.
    
 0.578
Lmac_0280
Transporting ATPase.
       0.527
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.