STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_0309Glycosyl hydrolase. (354 aa)    
Predicted Functional Partners:
chiA1
Chitinase A1 precursor.
     
 0.862
Lmac_2930
N-acetyl-beta-glucosaminidase.
     
  0.858
Lmac_0308
Periplasmic protein.
       0.702
Lmac_0138
N-acetyl-beta-glucosaminidase.
  
  
 
0.688
Lmac_2247
Putative secreted esterase.
  
 
 0.671
Lmac_0310
Na /H -dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.661
Lmac_0061
(serine-type) D-alanyl-D-alanine carboxypeptidase.
 
 
 0.449
dacB
D-alanyl-D-alanine carboxypeptidase.
  
  
 0.438
Lmac_1878
Beta-lactamase.
 
 0.438
Lmac_0389
D-Ala-D-Ala carboxypeptidase.
  
  
 0.412
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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