STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_0335Fimbrial protein, type IV pilin, PilE; Belongs to the N-Me-Phe pilin family. (136 aa)    
Predicted Functional Partners:
pilE
type-IV pilin.
 
  
 0.832
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
 
   
 0.590
bolA
Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family.
       0.554
Lmac_0337
Hypothetical protein.
       0.533
lspG
Type II secretory pathway protein LspG.
   
 0.533
Lmac_0461
General secretion pathway protein LspH.
   
 0.523
lspI
Type II secretory pathway protein LspI.
   
 0.523
Lmac_2280
Conjugal transfer mating pair stabilization protein TraN.
   
 0.523
Lmac_0333
Acylphosphatase.
       0.500
Lmac_0334
Hypothetical protein.
       0.500
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.